
QuPath
QuPath is cross-platform, user-friendly open source software for digital pathology and whole slide image analysis, written using JavaFX. QuPath has also been designed to be developer-friendly, and …
Overview (QuPath 0.6.0) - GitHub Pages
Classes to enable cell detection, implemented with the help of ImageJ as an image processing library.
PathObject (QuPath 0.6.0) - GitHub Pages
Important: This is an experimental feature introduced in QuPath v0.4.0 to provide an alternative way to interact with classifications and to add support for multiple classifications. It is possible that this …
QP (QuPath 0.6.0) - GitHub Pages
The intended use is for QuPath to set this to be the current image data in the user interface, when running interactively. This is not necessarily always the image that is 'current' when running scripts, …
ImageData (QuPath 0.6.0) - GitHub Pages
Class ImageData<T> java.lang.Object qupath.lib.images.ImageData<T> Type Parameters: T - All Implemented Interfaces: AutoCloseable, EventListener, PathObjectHierarchyListener, …
DistanceTools (QuPath 0.6.0) - GitHub Pages
java.lang.Object qupath.lib.analysis.DistanceTools public class DistanceToolsextends Object
Commands (QuPath 0.6.0) - GitHub Pages
Create a window summarizing license information for QuPath and its third party dependencies.
ROI (QuPath 0.6.0) - GitHub Pages
Base interface for defining regions of interest (ROIs) within QuPath. In general, anything that returns a coordinate should be defined in terms of pixels from the top left of the full-resolution image.
WatershedCellDetection (QuPath 0.6.0) - GitHub Pages
Default command for cell detection within QuPath, assuming either a nuclear or cytoplasmic staining. To automatically classify cells as positive or negative along with detection, see PositiveCellDetection.
MeasurementExporter (QuPath 0.6.0)
java.lang.Object qupath.lib.gui.tools.MeasurementExporter public class MeasurementExporterextends Object